Moleculera Labs Educational Series:

Case report: Identification of ultra-rare genetic variants in pediatric acute onset neuropsychiatric syndrome (PANS) by exome and whole genome sequencing

Identification of ultra-rare genetic variants in PANS

“In the current study, we used next generation sequencing to search for ultra-rare genetic variants in patients who met diagnostic criteria for PANS as established by the PANS Consensus Conference.” 2

“Mutations were identified in 21 patients in 11 genes that separate into two broad functional categories: those that affect peripheral innate and adaptive immune pathways, and those that are expressed primarily in cortical neurons, where they function as synaptic regulators and have all been implicated in other neurological and neurodevelopmental disorders.”

“The findings additionally indicated that when mutated, the majority of genes could have unanticipated effects on immune cells, especially in response to infectious diseases. ”

“In addition, several genes are expressed in the choroid plexus and brain vasculature, suggesting they might contribute to a breach in the blood-CSF barrier and blood–brain barrier (BBB) that accompanies inflammation and infection.”

“In conclusion, we identified ultra-rare genetic variants in PANS patients that appear to function at multiple levels of the neuroinflammatory circuit, including peripheral and central innate immunity, synaptogenesis, the blood-CSF barrier, and perhaps the enteric nervous system.”



  1. Ayşegül Efe, SARS-CoV-2/COVID-19 associated pediatric acute-onset neuropsychiatric syndrome a case report of female twin adolescents, Psychiatry Research Case Reports, Volume 1, Issue 2, 2022, 100074, ISSN 2773-0212, https://doi.org/10.1016/j.psycr.2022.100074.
  2. Trifiletti R, Lachman HM, Manusama O, Zheng D, Spalice A, Chiurazzi P, Schornagel A, Serban AM, van Wijck R, Cunningham JL, Swagemakers S, van der Spek PJ. Identification of ultra-rare genetic variants in pediatric acute onset neuropsychiatric syndrome (PANS) by exome and whole genome sequencing. Sci Rep. 2022 Jun 30;12(1):11106. doi: 10.1038/s41598-022-15279-3. PMID: 35773312; PMCID: PMC9246359.
  3. Ilyas U, Umar Z, Lin D (August 26, 2022) Group A Beta-Hemolytic Streptococcus-Induced Tic-Like Movement Disorder in an Adult: A Case Report. Cureus 14(8): e28451. doi:10.7759/cureus.28451.
  4. Soltani Khaboushan A, Pahlevan-Fallahy M-T, Shobeiri P, Teixeira AL, Rezaei N (2022) Cytokines and chemokines profile in encephalitis patients: A meta-analysis. PLoS ONE 17(9): e0273920. https://doi.org/10.1371/journal.pone.0273920.